The main story follows Ringo's mission to try and stop Puyo from flooding her world. Instead of the course system used in previous games, the story is divided into six linear acts, each act taking place in several different areas, and each act being divided into several episodes. Although some characters seem to join the party in a sort of Puyo Puyo~n fashion, the player is only allowed to use Ringo for the first playthrough. Completion of the game allows for the use of the other party members when one replays the episodes, leading to alternate scenarios.